By Elizabeth DuPre and Kirstie Whitaker
This month we continued our Open Science Demo Call series by speaking to Ariel Rokem, Dora Hermes, and Tammy Vanderwal about three initiatives they’re involved with that promote openness in neuroimaging research.
Ariel introduced us to NiPy--short for NeuroImaging in Python--which is a large community-of-practice to support using python for neuroimaging. He explained that NiPy exists within the broader SciPy--short for Scientific computing in Python--community, and it unites many individuals who use Python in their scientific analyses. As open communities, Ariel pointed out that anyone is welcome to use the NiPy and SciPy software as well as to participate in its development. If you’re interested in hearing more, he encourages you to check out the NiPy mailing list or the annual SciPy conference!
Dora told us about iEEG BIDS extension proposal, a proposed extension to the BIDS standard for structuring human intracranial electroencephalography (iEEG) data. She explained that to date, current challenges with iEEG data sharing include the large variability in both electrode locations as well as data formats across sites. The proposed extension will create a standardized structure to store iEEG data and metadata, allowing for novel, multi-model analyses via integration of iEEG with MRI, MEG and EEG. To contribute to the development of the iEEG BIDS extension, Dora encourages checking out the current draft or commenting on the BIDS mailing list.